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Proteomics. 2015 Apr;15(8):1437-42. doi: 10.1002/pmic.201400361. Epub 2015 Feb 11.

The Unipept metaproteomics analysis pipeline.

Author information

1
Faculty of Sciences, Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium.

Abstract

Unipept (http://unipept.ugent.be) is a web application that offers a user-friendly way to explore the biodiversity of complex metaproteome samples by providing interactive visualizations. In this article, the updates and changes to Unipept since its initial release are presented. This includes the addition of interactive sunburst and treeview visualizations to the multipeptide analysis, the foundations of an application programming interface (API) and a command line interface, updated data sources, and the open-sourcing of the entire application under the MIT license.

KEYWORDS:

Biodiversity analysis; Bioinformatics; Data visualization; Metaproteomics; Tryptic peptides

PMID:
25477242
DOI:
10.1002/pmic.201400361
[Indexed for MEDLINE]

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