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V3 net charge: additional tool in HIV-1 tropism prediction.
Montagna C, De Crignis E, Bon I, Re MC, Mezzaroma I, Turriziani O, Graziosi C, Antonelli G. Montagna C, et al. AIDS Res Hum Retroviruses. 2014 Dec;30(12):1203-12. doi: 10.1089/aid.2014.0006. AIDS Res Hum Retroviruses. 2014. PMID: 25322170
Covariance of charged amino acids at positions 322 and 440 of HIV-1 Env contributes to coreceptor specificity of subtype B viruses, and can be used to improve the performance of V3 sequence-based coreceptor usage prediction algorithms.
Cashin K, Sterjovski J, Harvey KL, Ramsland PA, Churchill MJ, Gorry PR. Cashin K, et al. PLoS One. 2014 Oct 14;9(10):e109771. doi: 10.1371/journal.pone.0109771. eCollection 2014. PLoS One. 2014. PMID: 25313689 Free PMC article.
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