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Front Genet. 2014 May 13;5:130. doi: 10.3389/fgene.2014.00130. eCollection 2014.

AlienTrimmer removes adapter oligonucleotides with high sensitivity in short-insert paired-end reads. Commentary on Turner (2014) Assessment of insert sizes and adapter content in FASTQ data from NexteraXT libraries.

Author information

1
Institut Pasteur, Microbial Evolutionary Genomics Paris, France ; Institut National de la Recherche Agronomique, UR1077, Unité Mathématique, Informatique et Génome Jouy-en-Josas, France ; Centre National de la Recherche Scientifique, UMR3525 Paris, France.
2
Institut Pasteur, Microbial Evolutionary Genomics Paris, France ; Centre National de la Recherche Scientifique, UMR3525 Paris, France.

KEYWORDS:

Alien Trimmer; Nextera®; cutadapt; index; insert; paired-end reads; primer; transposase sequence

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