Levels of extracellular sHIP synthesized by S. pyogenes strains SF370 and AP1 and the amount of sHIP, the streptococcal mitogenic exotoxin Z (SmeZ), M1 protein, and protein H in strain AP1 measured by SRM-MS and heavy labeled peptides. A, culture media (TH broth) of strains SF370 and AP1 were collected at stationary growth phase in two biological replicates. The media were concentrated, diafiltered, and trypsin-digested, and the resulting peptides were analyzed with shotgun MS. Proteins were identified and quantified using a 1% false discovery rate with the OpenMS pipeline (). Shown is average sHIP abundance of the biological replicates ± S.D. (error bars) normalized to the total ion count of each sample. B, S. pyogenes strain AP1 was grown for 9 h, and samples of cells and medium were collected in triplicates at 0, 1.5, 3, 4.5, 6, 7.5, and 9 h. The A620 nm is indicated with black spheres (left-hand axis), and the respective cfu/ml values are shown with white squares (right-hand axis). C, the amount of sHIP was measured in the cell (black bars, left-hand axis) and medium (black spheres, right-hand axis) fractions by SRM-MS. The amount of sHIP in the medium is compared with that of the known secreted S. pyogenes virulence factor SmeZ (Spy1998) (light gray triangles, right-hand axis). D, the amounts of M1 protein (Spy2018) and protein H were similarly measured in the cell and medium fractions by SRM-MS and AQUA peptides for comparison. In C and D, bars indicate the amount of protein in the cell fraction (left-hand axis, pmol in total fraction), and lines show the amount of protein in the medium fraction (right-hand axis, pmol in total fraction).