Format

Send to

Choose Destination
Hum Genet. 2014 Aug;133(8):1011-22. doi: 10.1007/s00439-014-1441-5. Epub 2014 Apr 18.

Conditions for the validity of SNP-based heritability estimation.

Author information

1
Department of Psychology, University of Minnesota Twin Cities, Minneapolis, MN, 55455, USA, leex2293@umn.edu.

Abstract

The heritability of a trait (h(2)) is the proportion of its population variance caused by genetic differences, and estimates of this parameter are important for interpreting the results of genome-wide association studies (GWAS). In recent years, researchers have adopted a novel method for estimating a lower bound on heritability directly from GWAS data that uses realized genetic similarities between nominally unrelated individuals. The quantity estimated by this method is purported to be the contribution to heritability that could in principle be recovered from association studies employing the given panel of SNPs (h(2)(SNP)). Thus far, the validity of this approach has mostly been tested empirically. Here, we provide a mathematical explication and show that the method should remain a robust means of obtaining h(2)(SNP)) under circumstances wider than those under which it has so far been derived.

PMID:
24744256
PMCID:
PMC4159725
DOI:
10.1007/s00439-014-1441-5
[Indexed for MEDLINE]
Free PMC Article

Supplemental Content

Full text links

Icon for Springer Icon for PubMed Central
Loading ...
Support Center