Complete genome sequence analysis identifies a new genotype of brassica yellows virus that infects cabbage and radish in China

Arch Virol. 2014 Aug;159(8):2177-80. doi: 10.1007/s00705-014-2027-1. Epub 2014 Mar 6.

Abstract

For brassica yellows virus (BrYV), proposed to be a member of a new polerovirus species, two clearly distinct genotypes (BrYV-A and BrYV-B) have been described. In this study, the complete nucleotide sequences of two BrYV isolates from radish and Chinese cabbage were determined. Sequence analysis suggested that these isolates represent a new genotype, referred to here as BrYV-C. The full-length sequences of the two BrYV-C isolates shared 93.4-94.8 % identity with BrYV-A and BrYV-B. Further phylogenetic analysis showed that the BrYV-C isolates formed a subgroup that was distinct from the BrYV-A and BrYV-B isolates based on all of the proteins except P5.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Brassica / virology*
  • China
  • Genome, Viral*
  • Luteoviridae / classification
  • Luteoviridae / genetics*
  • Luteoviridae / isolation & purification*
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Plant Diseases / virology*
  • Raphanus / virology*
  • Sequence Analysis

Associated data

  • GENBANK/JN015068
  • GENBANK/KF015269