Failure to find evidence for deletion of LCE3C and LCE3B genes at PSORS4 contributing to psoriasis susceptibility in Tunisian families

Pathol Biol (Paris). 2014 Feb;62(1):34-7. doi: 10.1016/j.patbio.2013.10.003. Epub 2014 Jan 28.

Abstract

Background: Recently, it has been shown that a deletion in the late cornified envelope (LCE) gene cluster (LCE3C_LCE3B-del) is associated with susceptibility to psoriasis in European and Asian populations. However, no study of this deletion has been performed in the North African population. The aim of the present study was to investigate whether this deletion is associated with familial psoriasis in Tunisian population.

Methods: A total of 34 patients and 55 healthy individuals were recruited from 7 multiplex families and a PCR assay was used to determine the association of this deletion. Its effect on susceptibility to psoriasis was assessed using the PDT program.

Results: We failed to detect any evidence of association between LCE3C_LCE3B-del and psoriasis in Tunisian families. No epistasic effect was found between the deletion and PSORS1 locus.

Conclusions: These findings indicate that the LCE3C_LCE3B-del does not contribute in a major way to psoriasis susceptibility in Tunisian families.

Keywords: Copy number variation; Family-based association study; Gene interaction; Genetics; Génétique; Interaction gène-gène; Psoriasis; Variation de nombre de copies; Étude d’association basée sur des familles.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Child
  • Chromosomes, Human, Pair 1 / genetics*
  • Chromosomes, Human, Pair 6 / genetics
  • Cornified Envelope Proline-Rich Proteins / deficiency*
  • Cornified Envelope Proline-Rich Proteins / genetics
  • Epistasis, Genetic
  • Family Health
  • Female
  • Genetic Predisposition to Disease / genetics
  • Genotype
  • HLA-C Antigens / genetics
  • Humans
  • INDEL Mutation
  • Linkage Disequilibrium
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • Psoriasis / epidemiology
  • Psoriasis / ethnology
  • Psoriasis / genetics*
  • Sequence Deletion*
  • Tunisia / epidemiology
  • Tunisia / ethnology
  • Young Adult

Substances

  • Cornified Envelope Proline-Rich Proteins
  • HLA-C Antigens
  • HLA-C*06 antigen
  • LCE3B protein, human
  • LCE3C protein, human