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Bioinformatics. 2014 May 1;30(9):1327-8. doi: 10.1093/bioinformatics/btt758. Epub 2014 Jan 9.

MetDraw: automated visualization of genome-scale metabolic network reconstructions and high-throughput data.

Author information

1
Department of Biomedical Engineering, University of Virginia, Charlottesville, VA 22908, USA.

Abstract

Metabolic reaction maps allow visualization of genome-scale models and high-throughput data in a format familiar to many biologists. However, creating a map of a large metabolic model is a difficult and time-consuming process. MetDraw fully automates the map-drawing process for metabolic models containing hundreds to thousands of reactions. MetDraw can also overlay high-throughput 'omics' data directly on the generated maps.

PMID:
24413519
PMCID:
PMC3998126
DOI:
10.1093/bioinformatics/btt758
[Indexed for MEDLINE]
Free PMC Article

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