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Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):781-6. doi: 10.1099/ijs.0.052993-0. Epub 2013 Nov 22.

Phyllobacterium loti sp. nov. isolated from nodules of Lotus corniculatus.

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1
Laboratorio de Bioquímica, Facultad de Agronomía, Universidad de la República, Montevideo, Uruguay.

Abstract

Strain S658(T) was isolated from a Lotus corniculatus nodule in a soil sample obtained in Uruguay. Phylogenetic analysis of the 16S rRNA gene and atpD gene showed that this strain clustered within the genus Phyllobacterium. The closest related species was, in both cases, Phyllobacterium trifolii PETP02(T) with 99.8 % sequence similarity in the 16S rRNA gene and 96.1 % in the atpD gene. The 16S rRNA gene contains an insert at the beginning of the sequence that has no similarities with other inserts present in the same gene in described rhizobial species. Ubiquinone Q-10 was the only quinone detected. Strain S658(T) differed from its closest relatives through its growth in diverse culture conditions and in the assimilation of several carbon sources. It was not able to reproduce nodules in Lotus corniculatus. The results of DNA-DNA hybridization, phenotypic tests and fatty acid analyses confirmed that this strain should be classified as a representative of a novel species of the genus Phyllobacterium, for which the name Phyllobacterium loti sp. nov. is proposed. The type strain is S658(T)( = LMG 27289(T) = CECT 8230(T)).

PMID:
24271211
PMCID:
PMC4080735
DOI:
10.1099/ijs.0.052993-0
[Indexed for MEDLINE]
Free PMC Article
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