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Bioinformatics. 2014 Jan 15;30(2):282-3. doi: 10.1093/bioinformatics/btt640. Epub 2013 Nov 12.

DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins.

Author information

1
Institute for Evolution and Biodiversity, Hüfferstrasse 1, Westphalian Wilhelms-University Münster, 48147 Münster, Germany, and Max Planck Institute for Infection Biology, Chariteplatz 1, 10117 Berlin, Germany.

Abstract

DoMosaics is an application that unifies protein domain annotation, domain arrangement analysis and visualization in a single tool. It simplifies the analysis of protein families by consolidating disjunct procedures based on often inconvenient command-line applications and complex analysis tools. It provides a simple user interface with access to domain annotation services such as InterProScan or a local HMMER installation, and can be used to compare, analyze and visualize the evolution of domain architectures.

AVAILABILITY AND IMPLEMENTATION:

DoMosaics is licensed under theApache License, Version 2.0, and binaries can be freely obtained from www.domosaics.net.

PMID:
24222210
DOI:
10.1093/bioinformatics/btt640
[Indexed for MEDLINE]

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