Half of the original Everglades system has been lost to drainage and development. What remains is included within the boundaries of the Everglades Protection Area (EPA), comprised of three Water Conservation Areas (WCAs) and Everglades National Park (Park). Inflows to the EPA contain elevated nutrient concentrations. Best management practices (BMPs) were implemented and six large wetlands called stormwater treatment areas (STAs) were constructed to improve water quality. We analyzed water quality in the WCAs and Park and performed an economic analysis of the STAs to remove nutrients from EPA inflows. In general, nutrient concentrations in all WCAs were higher during the pre-STA period than after the STAs became operational. In WCA2 and the Park, total phosphorus (TP) trends showed more negative slopes prior, as compared to after, the STAs became operational. These results suggest that BMPs lead to large initial decreases in nutrient export resulting in improved downstream water quality. A preliminary economic analysis shows that operation and management of the STAs are complicated and cost intensive. Comparing the cost of phosphorus (P) removal from water entering the EPA using BMPs and STAs may not currently be viable. BMPs prevent P from being applied to, or leaving from agricultural fields while STAs remove P from stormwater. We expect nutrient concentrations in water flowing into and out of the STAs to decline as both BMPs and STAs become more effective. We suggest an economic analysis of BMPs, STAs, and other potential approaches to determine the most cost-effective methods to reduce nutrient concentrations and related stressors affecting the Everglades.