We develop a facile synthesis route to prepare Cu doped hollow structured manganese oxide mesocrystals with controlled phase structure and morphology using manganese carbonate as the reactant template. It is shown that Cu dopant is homogeneously distributed among the hollow manganese oxide microspherical samples, and it is embedded in the lattice of manganese oxide by substituting Mn(3+) in the presence of Cu(2+). The crystal structure of manganese oxide products can be modulated to bixbyite Mn2O3 and tetragonal Mn3O4 in the presence of annealing gas of air and nitrogen, respectively. The incorporation of Cu into Mn2O3 and Mn3O4 induces a great microstructure evolution from core-shell structure for pure Mn2O3 and Mn3O4 samples to hollow porous spherical Cu-doped Mn2O3 and Mn3O4 samples with a larger surface area, respectively. The Cu-doped hollow spherical Mn2O3 sample displays a higher specific capacity of 642 mAhg(-1) at a current density of 100 mA g(-1) after 100 cycles, which is about 1.78 times improvement compared to that of 361 mA h g(-1) for the pure Mn2O3 sample, displaying a Coulombic efficiency of up to 99.5%. The great enhancement of the electrochemical lithium storage performance can be attributed to the improvement of the electronic conductivity and lithium diffusivity of electrodes. The present results have verified the ability of Cu doping to improve electrochemical lithium storage performances of manganese oxides.