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PLoS One. 2013 Sep 11;8(9):e73487. doi: 10.1371/journal.pone.0073487. eCollection 2013.

Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study.

Author information

1
Computer Simulation and Modelling (Co.S.Mo.) Lab, Parc Científic de Barcelona, Barcelona, Spain.

Abstract

We study by means of analytical calculation and stochastic simulations how intrinsic noise modifies the bifurcation diagram of gene regulatory processes that can be effectively described by the Langevin formalism. In a general context, our study raises the intriguing question of how biochemical fluctuations redesign the epigenetic landscape in differentiation processes. We have applied our findings to a general class of regulatory processes that includes the simplest case that displays a bistable behavior and hence phenotypic variability: the genetic auto-activating switch. Thus, we explain why and how the noise promotes the stability of the low-state phenotype of the switch and show that the bistable region is extended when increasing the intensity of the fluctuations. This phenomenology is found in a simple one-dimensional model of the genetic switch as well as in a more detailed model that takes into account the binding of the protein to the promoter region. Altogether, we prescribe the analytical means to understand and quantify the noise-induced modifications of the bifurcation points for a general class of regulatory processes where the genetic bistable switch is included.

PMID:
24039958
PMCID:
PMC3770683
DOI:
10.1371/journal.pone.0073487
[Indexed for MEDLINE]
Free PMC Article

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