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J Biol Chem. 2013 Jun 7;288(23):16690-703. doi: 10.1074/jbc.M113.463315. Epub 2013 Apr 24.

High mobility group N proteins modulate the fidelity of the cellular transcriptional profile in a tissue- and variant-specific manner.

Author information

1
Protein Section, Laboratory of Metabolism, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892, USA.

Abstract

The nuclei of most vertebrate cells contain members of the high mobility group N (HMGN) protein family, which bind specifically to nucleosome core particles and affect chromatin structure and function, including transcription. Here, we study the biological role of this protein family by systematic analysis of phenotypes and tissue transcription profiles in mice lacking functional HMGN variants. Phenotypic analysis of Hmgn1(tm1/tm1), Hmgn3(tm1/tm1), and Hmgn5(tm1/tm1) mice and their wild type littermates with a battery of standardized tests uncovered variant-specific abnormalities. Gene expression analysis of four different tissues in each of the Hmgn(tm1/tm1) lines reveals very little overlap between genes affected by specific variants in different tissues. Pathway analysis reveals that loss of an HMGN variant subtly affects expression of numerous genes in specific biological processes. We conclude that within the biological framework of an entire organism, HMGNs modulate the fidelity of the cellular transcriptional profile in a tissue- and HMGN variant-specific manner.

KEYWORDS:

Chromatin; Chromosomes/Non-histone Chromosomal Proteins; Gene Regulation; HMG Proteins; Mouse Physiology; Transcriptomics; Transgenic Mice

PMID:
23620591
PMCID:
PMC3675603
DOI:
10.1074/jbc.M113.463315
[Indexed for MEDLINE]
Free PMC Article
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