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Items: 1 to 20 of 58

1.

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus.

Marcet-Houben M, Ballester AR, de la Fuente B, Harries E, Marcos JF, González-Candelas L, Gabaldón T.

BMC Genomics. 2012 Nov 21;13:646. doi: 10.1186/1471-2164-13-646.

2.

Transport of macromolecules across arterial wall in the presence of local endothial injury.

Nir A, Pfeffer R.

J Theor Biol. 1979 Dec 21;81(4):685-711. No abstract available.

PMID:
231713
3.
4.

Toward community standards in the quest for orthologs.

Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J; Quest for Orthologs Consortium.

Bioinformatics. 2012 Mar 15;28(6):900-4. doi: 10.1093/bioinformatics/bts050. Epub 2012 Feb 12.

5.

Selection of marker genes using whole-genome DNA polymorphism analysis.

Bohle HM, Gabaldón T.

Evol Bioinform Online. 2012;8:161-9. doi: 10.4137/EBO.S8989. Epub 2012 Mar 19.

6.

Comparison of gene repertoires and patterns of evolutionary rates in eight aphid species that differ by reproductive mode.

Ollivier M, Gabaldón T, Poulain J, Gavory F, Leterme N, Gauthier JP, Legeai F, Tagu D, Simon JC, Rispe C.

Genome Biol Evol. 2012;4(2):155-67. doi: 10.1093/gbe/evr140. Epub 2012 Jan 2.

7.

Evolutionary histories of expanded peptidase families in Schistosoma mansoni.

Silva LL, Marcet-Houben M, Zerlotini A, Gabaldón T, Oliveira G, Nahum LA.

Mem Inst Oswaldo Cruz. 2011 Nov;106(7):864-77.

8.

CycADS: an annotation database system to ease the development and update of BioCyc databases.

Vellozo AF, Véron AS, Baa-Puyoulet P, Huerta-Cepas J, Cottret L, Febvay G, Calevro F, Rahbé Y, Douglas AE, Gabaldón T, Sagot MF, Charles H, Colella S.

Database (Oxford). 2011 Apr 7;2011:bar008. doi: 10.1093/database/bar008. Print 2011.

9.

Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.

Sánchez R, Serra F, Tárraga J, Medina I, Carbonell J, Pulido L, de María A, Capella-Gutíerrez S, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H.

Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4. doi: 10.1093/nar/gkr408. Epub 2011 Jun 6.

10.

A midzone-based ruler adjusts chromosome compaction to anaphase spindle length.

Neurohr G, Naegeli A, Titos I, Theler D, Greber B, Díez J, Gabaldón T, Mendoza M, Barral Y.

Science. 2011 Apr 22;332(6028):465-8. doi: 10.1126/science.1201578. Epub 2011 Mar 10.

11.

Evidence for short-time divergence and long-time conservation of tissue-specific expression after gene duplication.

Huerta-Cepas J, Dopazo J, Huynen MA, Gabaldón T.

Brief Bioinform. 2011 Sep;12(5):442-8. doi: 10.1093/bib/bbr022. Epub 2011 Apr 22.

PMID:
21515902
12.

Assigning duplication events to relative temporal scales in genome-wide studies.

Huerta-Cepas J, Gabaldón T.

Bioinformatics. 2011 Jan 1;27(1):38-45. doi: 10.1093/bioinformatics/btq609. Epub 2010 Nov 11.

PMID:
21075746
13.

PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions.

Huerta-Cepas J, Capella-Gutierrez S, Pryszcz LP, Denisov I, Kormes D, Marcet-Houben M, Gabaldón T.

Nucleic Acids Res. 2011 Jan;39(Database issue):D556-60. doi: 10.1093/nar/gkq1109. Epub 2010 Nov 12.

14.

Regulation of Candida glabrata oxidative stress resistance is adapted to host environment.

Roetzer A, Klopf E, Gratz N, Marcet-Houben M, Hiller E, Rupp S, Gabaldón T, Kovarik P, Schüller C.

FEBS Lett. 2011 Jan 21;585(2):319-27. doi: 10.1016/j.febslet.2010.12.006. Epub 2010 Dec 13.

15.

MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score.

Pryszcz LP, Huerta-Cepas J, Gabaldón T.

Nucleic Acids Res. 2011 Mar;39(5):e32. doi: 10.1093/nar/gkq953. Epub 2010 Dec 11.

16.

TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees.

Marcet-Houben M, Gabaldón T.

Nucleic Acids Res. 2011 May;39(10):e66. doi: 10.1093/nar/gkr087. Epub 2011 Feb 18.

17.

Predicting phenotypic traits of prokaryotes from protein domain frequencies.

Lingner T, Mühlhausen S, Gabaldón T, Notredame C, Meinicke P.

BMC Bioinformatics. 2010 Sep 24;11:481. doi: 10.1186/1471-2105-11-481.

18.

From Saccharomyces cerevisiae to Candida glabratain a few easy steps: important adaptations for an opportunistic pathogen.

Roetzer A, Gabaldón T, Schüller C.

FEMS Microbiol Lett. 2011 Jan;314(1):1-9. doi: 10.1111/j.1574-6968.2010.02102.x. Epub 2010 Sep 16. Review.

19.

Impact of the mitochondrial genetic background in complex III deficiency.

Gil Borlado MC, Moreno Lastres D, Gonzalez Hoyuela M, Moran M, Blazquez A, Pello R, Marin Buera L, Gabaldon T, Garcia Peñas JJ, Martín MA, Arenas J, Ugalde C.

PLoS One. 2010 Sep 17;5(9). pii: e12801. doi: 10.1371/journal.pone.0012801.

20.

YibK is the 2'-O-methyltransferase TrmL that modifies the wobble nucleotide in Escherichia coli tRNA(Leu) isoacceptors.

Benítez-Páez A, Villarroya M, Douthwaite S, Gabaldón T, Armengod ME.

RNA. 2010 Nov;16(11):2131-43. doi: 10.1261/rna.2245910. Epub 2010 Sep 20.

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