Format

Send to

Choose Destination
See comment in PubMed Commons below
Nucleic Acids Res. 2013 Jan;41(Database issue):D728-31. doi: 10.1093/nar/gks1087. Epub 2012 Nov 17.

SchistoDB: an updated genome resource for the three key schistosomes of humans.

Author information

1
Centro de Excelência em Bioinformática, National Institute for Science and Technology in Tropical Diseases FIOCRUZ-Minas, Belo Horizonte, MG 30190-002, Brazil.

Abstract

The new release of SchistoDB (http://SchistoDB.net) provides a rich resource of genomic data for key blood flukes (genus Schistosoma) which cause disease in hundreds of millions of people worldwide. SchistoDB integrates whole-genome sequence and annotation of three species of the genus and provides enhanced bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface provided through the Strategies Web Development Kit is available for the mining and visualization of the data. Genomic scale data can be queried based on BLAST searches, annotation keywords and gene ID searches, gene ontology terms, sequence motifs, protein characteristics and phylogenetic relationships. Search strategies can be saved within a user's profile for future retrieval and may also be shared with other researchers using a unique web address.

PMID:
23161692
PMCID:
PMC3531198
DOI:
10.1093/nar/gks1087
[Indexed for MEDLINE]
Free PMC Article
PubMed Commons home

PubMed Commons

0 comments
How to join PubMed Commons

    Supplemental Content

    Full text links

    Icon for Silverchair Information Systems Icon for PubMed Central
    Loading ...
    Support Center