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Nucleic Acids Res. 2013 Jan;41(Database issue):D1172-5. doi: 10.1093/nar/gks1105. Epub 2012 Nov 17.

TropGeneDB, the multi-tropical crop information system updated and extended.

Author information

1
CIRAD, UMR AGAP, F-34398 Montpellier, France. chantal.hamelin@cirad.fr

Abstract

TropGeneDB (http://tropgenedb.cirad.fr) was created to store genetic, molecular and phenotypic data on tropical crop species. The most common data stored in TropGeneDB are molecular markers, quantitative trait loci, genetic and physical maps, genetic diversity, phenotypic diversity studies and information on genetic resources (geographic origin, parentage, collection). TropGeneDB is organized on a crop basis with currently nine public modules (banana, cocoa, coconut, coffee, cotton, oil palm, rice, rubber tree, sugarcane). Crop-specific Web consultation interfaces have been designed to allow quick consultations and personalized complex queries. TropGeneDB is a component of the South Green Bioinformatics Platform (http://southgreen.cirad.fr/).

PMID:
23161680
PMCID:
PMC3531089
DOI:
10.1093/nar/gks1105
[Indexed for MEDLINE]
Free PMC Article

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