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Nucleic Acids Res. 2013 Jan;41(Database issue):D402-7. doi: 10.1093/nar/gks993. Epub 2012 Oct 26.

ClusterMine360: a database of microbial PKS/NRPS biosynthesis.

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1
Department of Chemistry, Center for Advanced Research in Environmental Genomics, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada.

Abstract

ClusterMine360 (http://www.clustermine360.ca/) is a database of microbial polyketide and non-ribosomal peptide gene clusters. It takes advantage of crowd-sourcing by allowing members of the community to make contributions while automation is used to help achieve high data consistency and quality. The database currently has >200 gene clusters from >185 compound families. It also features a unique sequence repository containing >10 000 polyketide synthase/non-ribosomal peptide synthetase domains. The sequences are filterable and downloadable as individual or multiple sequence FASTA files. We are confident that this database will be a useful resource for members of the polyketide synthases/non-ribosomal peptide synthetases research community, enabling them to keep up with the growing number of sequenced gene clusters and rapidly mine these clusters for functional information.

PMID:
23104377
PMCID:
PMC3531105
DOI:
10.1093/nar/gks993
[Indexed for MEDLINE]
Free PMC Article
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