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Comput Methods Programs Biomed. 2013 Jan;109(1):74-6. doi: 10.1016/j.cmpb.2012.08.008. Epub 2012 Oct 1.

TreeVis: a MATLAB-based tool for tree visualization.

Author information

1
Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, USA.

Abstract

Network-based analyses of high-dimensional biological data often produce results in the form of tree structures. Generating easily interpretable layouts to visualize these tree structures is a non-trivial task. We present a new visualization algorithm to generate two-dimensional layouts for complex tree structures. Implementations in both MATLAB and R are provided.

PMID:
23036855
PMCID:
PMC3508366
DOI:
10.1016/j.cmpb.2012.08.008
[Indexed for MEDLINE]
Free PMC Article
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