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Curr Protoc Bioinformatics. 2012 Sep;Chapter 12:Unit12.11. doi: 10.1002/0471250953.bi1211s39.

Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM.

Author information

1
Center for Non-Coding RNA in Technology and Health, Department of Veterinary Clinical and Animal Sciences, University of Copenhagen, Copenhagen, Denmark.

Abstract

This unit describes how to use Foldalign and FoldalignM to make structural alignments of non-protein-coding-RNA (ncRNA). These tools can be used to find new ncRNAs, to find the structure of novel ncRNAs, and to improve alignments for known ncRNAs.

PMID:
22948726
DOI:
10.1002/0471250953.bi1211s39
[Indexed for MEDLINE]

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