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Mol Cell. 2012 Aug 24;47(4):608-21. doi: 10.1016/j.molcel.2012.05.051. Epub 2012 Jul 5.

Cofactor-mediated restriction of GATA-1 chromatin occupancy coordinates lineage-specific gene expression.

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1
Northwestern University, Division of Hematology/Oncology, Chicago, IL 60611, USA.

Abstract

GATA-1 and its cofactor FOG-1 are required for the differentiation of erythrocytes and megakaryocytes. In contrast, mast cell development requires GATA-1 and the absence of FOG-1. Through genome-wide comparison of the chromatin occupancy of GATA-1 and a naturally occurring mutant that cannot bind FOG-1 (GATA-1(V205G)), we reveal that FOG-1 intricately regulates the chromatin occupancy of GATA-1. We identified GATA1-selective and GATA-1(V205G)-selective binding sites and show that GATA-1, in the absence of FOG-1, occupies GATA-1(V205G)-selective sites, but not GATA1-selective sites. By integrating ChIP-seq and gene expression data, we discovered that GATA-1(V205G) binds and activates mast cell-specific genes via GATA-1(V205G)-selective sites. We further show that exogenous expression of FOG-1 in mast cells leads to displacement of GATA-1 from mast cell-specific genes and causes their downregulation. Together these findings establish a mechanism of gene regulation whereby a non-DNA binding cofactor directly modulates the occupancy of a transcription factor to control lineage specification.

PMID:
22771118
PMCID:
PMC3432917
DOI:
10.1016/j.molcel.2012.05.051
[Indexed for MEDLINE]
Free PMC Article
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