Format

Send to

Choose Destination
Bioinformatics. 2012 May 15;28(10):1411-2. doi: 10.1093/bioinformatics/bts157. Epub 2012 Apr 11.

CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human.

Author information

1
Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai, 200092, China.

Abstract

Transcription and chromatin regulators, and histone modifications play essential roles in gene expression regulation. We have created CistromeMap as a web server to provide a comprehensive knowledgebase of all of the publicly available ChIP-Seq and DNase-Seq data in mouse and human. We have also manually curated metadata to ensure annotation consistency, and developed a user-friendly display matrix for quick navigation and retrieval of data for specific factors, cells and papers. Finally, we provide users with summary statistics of ChIP-Seq and DNase-Seq studies.

PMID:
22495751
PMCID:
PMC3348563
DOI:
10.1093/bioinformatics/bts157
[Indexed for MEDLINE]
Free PMC Article

Supplemental Content

Full text links

Icon for Silverchair Information Systems Icon for PubMed Central
Loading ...
Support Center