Albidovulum xiamenense sp. nov., a moderately thermophilic bacterium from a terrestrial hot spring

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1609-1612. doi: 10.1099/ijs.0.034454-0. Epub 2011 Sep 2.

Abstract

An aerobic, motile, moderately thermophilic, rod-shaped bacterium, strain YBY-7(T), was isolated from a terrestrial hot spring of a garden exhibition located in Xiamen City, Fujian Province, People's Republic of China. Cells of strain YBY-7(T) were Gram-negative, irregular rods, 2-6 µm long and 0.4-0.6 µm wide, with polar flagella, and the organism formed beige colonies. The temperature and pH ranges for growth of strain YBY-7(T) were 28-65 °C (optimum 50-58 °C) and pH 6.5-9.5 (optimum pH 7.5-8.5). Growth occurred in the presence of 5.5% NaCl (optimum 3.0%). Phylogenetic analysis based on the 16S rRNA gene sequence revealed that Albidovulum inexpectatum FRR-10(T) was its closest neighbour (95.9% similarity). Ubiquinone (Q-10) was the sole respiratory quinone and the DNA G+C content of strain YBY-7(T) was 70.6 mol%. The predominant polar lipids were phosphatidylcholine, phosphatidylglycerol and phosphatidylethanolamine. The major fatty acids were C(18:1)ω7c (29.3%), C(19:0) cyclo ω8c (25.6%), C(18:0) (23.6%) and C(16:0) (9.6%). Based on its physiological characteristics and our phylogenetic analysis, we propose that strain YBY-7(T) represents a novel species of the genus Albidovulum, for which the name Albidovulum xiamenense sp. nov. is proposed, with the type strain YBY-7(T) (=MCCC 1A06317(T) =CGMCC 1.10789(T) =LMG 26247(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Bacterial Typing Techniques
  • Base Composition
  • China
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Flagella / physiology
  • Hot Springs / microbiology*
  • Hydrogen-Ion Concentration
  • Locomotion
  • Microscopy, Electron, Transmission
  • Molecular Sequence Data
  • Phospholipids / analysis
  • Phylogeny
  • Quinones / analysis
  • RNA, Ribosomal, 16S / genetics
  • Rhodobacteraceae / classification*
  • Rhodobacteraceae / genetics
  • Rhodobacteraceae / isolation & purification*
  • Rhodobacteraceae / physiology
  • Sequence Analysis, DNA
  • Sodium Chloride / metabolism
  • Temperature

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phospholipids
  • Quinones
  • RNA, Ribosomal, 16S
  • Sodium Chloride

Associated data

  • GENBANK/HQ709061