Site-directed mutagenesis of epoxide hydrolase to probe catalytic amino acid residues and reaction mechanism

FEBS Lett. 2011 Aug 4;585(15):2545-50. doi: 10.1016/j.febslet.2011.07.006. Epub 2011 Jul 13.

Abstract

Epoxide hydrolase from Rhodococcus opacus catalyzes the stereospecific hydrolysis of cis-epoxysuccinate to L(+)-tartrate. It shows low but significant similarity to haloacid dehalogenase and haloacetate dehalogenase (16-23% identity). To identify catalytically important residues, we mutated 29 highly conserved charged and polar amino acid residues (except for one alanine). The replacement of D18, D193, R55, K164, H190, T22, Y170, N134 and A188 led to a significant loss in the enzyme activity, indicating their involvement in the catalysis. Single and multiple turnover reaction studies show that the enzyme reaction proceeded through the two-step mechanism involving the formation of a covalent intermediate. We discuss the roles of these residues and propose its possible reaction mechanism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biocatalysis*
  • Catalytic Domain
  • Epoxide Hydrolases / genetics*
  • Epoxide Hydrolases / metabolism*
  • Kinetics
  • Mutagenesis, Site-Directed*
  • Rhodococcus / enzymology
  • Stereoisomerism

Substances

  • Amino Acids
  • Bacterial Proteins
  • Epoxide Hydrolases