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Neural Comput. 2011 Sep;23(9):2242-88. doi: 10.1162/NECO_a_00167. Epub 2011 Jun 14.

Active data collection for efficient estimation and comparison of nonlinear neural models.

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Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.


The stimulus-response relationship of many sensory neurons is nonlinear, but fully quantifying this relationship by a complex nonlinear model may require too much data to be experimentally tractable. Here we present a theoretical study of a general two-stage computational method that may help to significantly reduce the number of stimuli needed to obtain an accurate mathematical description of nonlinear neural responses. Our method of active data collection first adaptively generates stimuli that are optimal for estimating the parameters of competing nonlinear models and then uses these estimates to generate stimuli online that are optimal for discriminating these models. We applied our method to simple hierarchical circuit models, including nonlinear networks built on the spatiotemporal or spectral-temporal receptive fields, and confirmed that collecting data using our two-stage adaptive algorithm was far more effective for estimating and comparing competing nonlinear sensory processing models than standard nonadaptive methods using random stimuli.

[Indexed for MEDLINE]

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