Ergodicity convergence test suggests telomere motion obeys fractional dynamics

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Apr;83(4 Pt 1):041919. doi: 10.1103/PhysRevE.83.041919. Epub 2011 Apr 22.

Abstract

Anomalous diffusion, observed in many biological processes, is a generalized description of a wide variety of processes, all obeying the same law of mean-square displacement. Identifying the basic mechanisms of these observations is important for deducing the nature of the biophysical systems measured. We implement a previously suggested method for distinguishing between fractional Langevin dynamics, fractional Brownian motion, and continuous time random walk based on the ergodic nature of the data. We apply the method together with the recently suggested P-variation test and the displacement correlation to the lately measured dynamics of telomeres in the nucleus of mammalian cells and find strong evidence that the telomeres motion obeys fractional dynamics. The ergodic dynamics are observed experimentally to fit fractional Brownian or Langevin dynamics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Nucleus / physiology*
  • Cell Nucleus / ultrastructure*
  • Computer Simulation
  • Diffusion
  • Humans
  • Models, Biological*
  • Models, Statistical
  • Telomere / physiology*
  • Telomere / ultrastructure*