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Nat Struct Mol Biol. 2010 Dec;17(12):1470-7. doi: 10.1038/nsmb.1925. Epub 2010 Nov 7.

Correlated conformational events in EF-G and the ribosome regulate translocation.

Author information

1
Department of Physiology and Biophysics, Weill Cornell Medical College of Cornell University, New York, New York, USA.

Abstract

In bacteria, the translocation of tRNA and mRNA with respect to the ribosome is catalyzed by the conserved GTPase elongation factor-G (EF-G). To probe the rate-determining features in this process, we imaged EF-G-catalyzed translocation from two unique structural perspectives using single-molecule fluorescence resonance energy transfer. The data reveal that the rate at which the ribosome spontaneously achieves a transient, 'unlocked' state is closely correlated with the rate at which the tRNA-like domain IV-V element of EF-G engages the A site. After these structural transitions, translocation occurs comparatively fast, suggesting that conformational processes intrinsic to the ribosome determine the rate of translocation. Experiments conducted in the presence of non-hydrolyzable GTP analogs and specific antibiotics further reveal that allosterically linked conformational events in EF-G and the ribosome mediate rapid, directional substrate movement and EF-G release.

PMID:
21057527
PMCID:
PMC2997181
DOI:
10.1038/nsmb.1925
[Indexed for MEDLINE]
Free PMC Article

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