The glycerophospho metabolome and its influence on amino acid homeostasis revealed by brain metabolomics of GDE1(-/-) mice

Chem Biol. 2010 Aug 27;17(8):831-40. doi: 10.1016/j.chembiol.2010.06.009.

Abstract

GDE1 is a mammalian glycerophosphodiesterase (GDE) implicated by in vitro studies in the regulation of glycerophophoinositol (GroPIns) and possibly other glycerophospho (GroP) metabolites. Here, we show using untargeted metabolomics that GroPIns is profoundly (>20-fold) elevated in brain tissue from GDE1(-/-) mice. Furthermore, two additional GroP metabolites not previously identified in eukaryotic cells, glycerophosphoserine (GroPSer) and glycerophosphoglycerate (GroPGate), were also highly elevated in GDE1(-/-) brains. Enzyme assays with synthetic GroP metabolites confirmed that GroPSer and GroPGate are direct substrates of GDE1. Interestingly, our metabolomic profiles also revealed that serine (both L-and D-) levels were significantly reduced in brains of GDE1(-/-) mice. These findings designate GroPSer as a previously unappreciated reservoir for free serine in the nervous system and suggest that GDE1, through recycling serine from GroPSer, may impact D-serine-dependent neural signaling processes in vivo.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / metabolism*
  • Animals
  • Brain / cytology
  • Brain / metabolism*
  • Homeostasis*
  • Inositol Phosphates / metabolism*
  • Male
  • Mass Spectrometry
  • Metabolome*
  • Metabolomics / methods*
  • Mice
  • Phosphoric Diester Hydrolases / deficiency*
  • Phosphoric Diester Hydrolases / metabolism
  • Serine / metabolism
  • Solubility
  • Water / chemistry

Substances

  • Amino Acids
  • Inositol Phosphates
  • Water
  • glycerylphosphoinositol
  • Serine
  • Phosphoric Diester Hydrolases
  • glycerophosphodiester phosphodiesterase