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Bioinformatics. 2010 Sep 15;26(18):2334-5. doi: 10.1093/bioinformatics/btq413. Epub 2010 Jul 11.

genoPlotR: comparative gene and genome visualization in R.

Author information

1
Department of Molecular Evolution, Uppsala University, Uppsala, Sweden. lionel.guy@ebc.uu.se

Abstract

The amount of gene and genome data obtained by next-generation sequencing technologies generates a need for comparative visualization tools. Complementing existing software for comparison and exploration of genomics data, genoPlotR automatically creates publication-grade linear maps of gene and genomes, in a highly automatic, flexible and reproducible way.

AVAILABILITY:

genoPlotR is a platform-independent R package, available with full source code under a GPL2 license at R-Forge: http://genoplotr.r-forge.r-project.org/.

PMID:
20624783
PMCID:
PMC2935412
DOI:
10.1093/bioinformatics/btq413
[Indexed for MEDLINE]
Free PMC Article

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