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Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jan;81(1 Pt 1):011902. Epub 2010 Jan 6.

Quasispecies theory for finite populations.

Author information

1
Department of Physics & Astronomy, Rice University, Houston, Texas 77005-1892, USA.

Abstract

We present stochastic, finite-population formulations of the Crow-Kimura and Eigen models of quasispecies theory, for fitness functions that depend in an arbitrary way on the number of mutations from the wild type. We include back mutations in our description. We show that the fluctuation of the population numbers about the average values is exceedingly large in these physical models of evolution. We further show that horizontal gene transfer reduces by orders of magnitude the fluctuations in the population numbers and reduces the accumulation of deleterious mutations in the finite population due to Muller's ratchet. Indeed, the population sizes needed to converge to the infinite population limit are often larger than those found in nature for smooth fitness functions in the absence of horizontal gene transfer. These analytical results are derived for the steady state by means of a field-theoretic representation. Numerical results are presented that indicate horizontal gene transfer speeds up the dynamics of evolution as well.

PMID:
20365394
PMCID:
PMC4479305
DOI:
10.1103/PhysRevE.81.011902
[Indexed for MEDLINE]
Free PMC Article

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