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Proteomics. 2010 May;10(9):1880-5. doi: 10.1002/pmic.200900723.

Pathway Palette: a rich internet application for peptide-, protein- and network-oriented analysis of MS data.

Author information

1
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115-6084, USA.

Abstract

Recent improvements in proteomic technologies have collectively yielded data sets that far exceed the capabilities of typical low-throughput interpretation strategies. Unfortunately, tools designed to leverage the "peptide-centric" content of MS-based proteomics lag the current rate of data production. Here, we describe Pathway Palette (http://blaispathways.dfci.harvard.edu), a freely accessible internet application that enables researchers to easily transition from peptides to biological pathways, while simultaneously retaining the qualitative and quantitative aspects of the underlying MS data.

PMID:
20198642
PMCID:
PMC3139977
DOI:
10.1002/pmic.200900723
[Indexed for MEDLINE]
Free PMC Article

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