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Bioinformatics. 2009 Oct 1;25(19):2619-20. doi: 10.1093/bioinformatics/btp468. Epub 2009 Jul 30.

metahdep: meta-analysis of hierarchically dependent gene expression studies.

Author information

1
Department of Mathematics and Statistics, Utah State University, Logan, UT 84322-3900, USA. john.r.stevens@usu.edu

Abstract

The metahdep package contains tools for combining the results of multiple gene expression studies. Unlike previous microarray meta-analysis packages, metahdep accounts for both sampling and hierarchical dependence among studies, as well as fundamental covariate differences between studies.

AVAILABILITY:

http://bioconductor.org/packages/release/Software.html

PMID:
19648140
DOI:
10.1093/bioinformatics/btp468
[Indexed for MEDLINE]
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