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Items: 7

1.

Segment-based multiple sequence alignment.

Rausch T, Emde AK, Weese D, Döring A, Notredame C, Reinert K.

Bioinformatics. 2008 Aug 15;24(16):i187-92. doi: 10.1093/bioinformatics/btn281.

PMID:
18689823
2.

R-Coffee: a method for multiple alignment of non-coding RNA.

Wilm A, Higgins DG, Notredame C.

Nucleic Acids Res. 2008 May;36(9):e52. doi: 10.1093/nar/gkn174. Epub 2008 Apr 17.

3.

Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee.

Armougom F, Moretti S, Poirot O, Audic S, Dumas P, Schaeli B, Keduas V, Notredame C.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W604-8.

4.

M-Coffee: combining multiple sequence alignment methods with T-Coffee.

Wallace IM, O'Sullivan O, Higgins DG, Notredame C.

Nucleic Acids Res. 2006 Mar 23;34(6):1692-9. Print 2006.

5.

3DCoffee: combining protein sequences and structures within multiple sequence alignments.

O'Sullivan O, Suhre K, Abergel C, Higgins DG, Notredame C.

J Mol Biol. 2004 Jul 2;340(2):385-95.

PMID:
15201059
6.

T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Notredame C, Higgins DG, Heringa J.

J Mol Biol. 2000 Sep 8;302(1):205-17.

PMID:
10964570
7.

COFFEE: an objective function for multiple sequence alignments.

Notredame C, Holm L, Higgins DG.

Bioinformatics. 1998 Jun;14(5):407-22.

PMID:
9682054

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