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Bioinformation. 2008 May 27;2(8):346-7.

PyDeT, a PyMOL plug-in for visualizing geometric concepts around proteins.

Author information

1
Department of Computer Science, Eotvos University, Pázmány Péter stny. 1/C, H-1118, Budapest, Hungary. devillmeister@gmail.com

Abstract

The fast growing Protein Data Bank (PDB) contains a vast amount of 3-dimensional data on proteins, and nucleic-acid structures obtained by X-ray crystallography and Nuclear Magnetic Resonance (NMR) spectroscopy. PyDeT is a PyMOL (molecular visualization software system) plug-in that visualize tessellations derived from the protein structure along with the source protein. PyDeT is released under a GNU General Public License (GPL) and is available from the authors.

KEYWORDS:

nucleic acids; plug-in; proteins; structures; visualization

PMID:
18685723
PMCID:
PMC2478735
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