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Bioinformatics. 2008 Jul 1;24(13):1549-51. doi: 10.1093/bioinformatics/btn227. Epub 2008 May 14.

qpcR: an R package for sigmoidal model selection in quantitative real-time polymerase chain reaction analysis.

Author information

1
Statistics Group, Department of Natural Sciences, Faculty of Life Sciences, University of Copenhagen, Copenhagen, Denmark.

Abstract

The qpcR library is an add-on to the free R statistical environment performing sigmoidal model selection in real-time quantitative polymerase chain reaction (PCR) data analysis. Additionally, the package implements the most commonly used algorithms for real-time PCR data analysis and is capable of extensive statistical comparison for the selection and evaluation of the different models based on several measures of goodness of fit.

AVAILABILITY:

www.dr-spiess.de/qpcR.html.

SUPPLEMENTARY INFORMATION:

Statistical evaluations of the implemented methods can be found at www.dr-spiess.de under 'Supplemental Data'.

PMID:
18482995
DOI:
10.1093/bioinformatics/btn227
[Indexed for MEDLINE]

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