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Curr Protoc Bioinformatics. 2003 Feb;Appendix 1:Appendix 1E. doi: 10.1002/0471250953.bia01es00.

Sequence file format conversion with command-line readseq.

Author information

1
Indiana University, Bloomington, Indiana, USA.

Abstract

One of the major challenges in using bioinformatics software is that there are a wide variety of sequence formats, e.g., GenBank, EMBL, and FASTA. It is often the case that a sequence or a set of sequences is in one format but is needed in another. This unit offers a solution to this problem--Readseq. Readseq is a program that can read and write 18 different formats.

PMID:
18428689
DOI:
10.1002/0471250953.bia01es00
[Indexed for MEDLINE]

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