Activation of bacterial ribonuclease P by macrolides

Biochemistry. 2008 Apr 1;47(13):4112-8. doi: 10.1021/bi701488q. Epub 2008 Mar 11.

Abstract

The effect of macrolide antibiotic spiramycin on RNase P holoenzyme and M1 RNA from Escherichia coli was investigated. Ribonuclease P (RNase P) is a ribozyme that is responsible for the maturation of 5' termini of tRNA molecules. Spiramycin revealed a dose-dependent activation on pre-tRNA cleavage by E. coli RNase P holoenzyme and M1 RNA. The K s and V max, as well as the K s(app) and V max(app) values of RNase P holoenzyme and M1 RNA in the presence or absence of spiramycin, were calculated from primary and secondary kinetic plots. It was found that the activity status of RNase P holoenzyme and M1 RNA is improved by the presence of spiramycin 18- and 12-fold, respectively. Primer extension analysis revealed that spiramycin induces a conformational change of the P10/11 structural element of M1 RNA, which is involved in substrate recognition.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • DNA Primers
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Activation
  • Escherichia coli / enzymology*
  • Macrolides / pharmacology*
  • Ribonuclease P / metabolism*

Substances

  • DNA Primers
  • Macrolides
  • Ribonuclease P