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Bioinformatics. 2008 Feb 1;24(3):430-2. Epub 2007 Dec 6.

TimeClust: a clustering tool for gene expression time series.

Author information

1
Dipartimento di Informatica e Sistemistica, Università degli Studi di Pavia, Via Ferrata 1, Pavia, Italy. paolo.magni@unipv.it

Abstract

TimeClust is a user-friendly software package to cluster genes according to their temporal expression profiles. It can be conveniently used to analyze data obtained from DNA microarray time-course experiments. It implements two original algorithms specifically designed for clustering short time series together with hierarchical clustering and self-organizing maps.

AVAILABILITY:

TimeClust executable files for Windows and LINUX platforms can be downloaded free of charge for non-profit institutions from the following web site: http://aimed11.unipv.it/TimeClust.

PMID:
18065427
DOI:
10.1093/bioinformatics/btm605
[Indexed for MEDLINE]
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