Arenimonas malthae sp. nov., a gammaproteobacterium isolated from an oil-contaminated site

Int J Syst Evol Microbiol. 2007 Dec;57(Pt 12):2790-2793. doi: 10.1099/ijs.0.64975-0.

Abstract

A Gram-negative, rod-shaped bacterium (CC-JY-1(T)) was isolated on nutrient agar from a soil sample collected from an oil-contaminated site located in Chyai county, Taiwan. 16S rRNA gene sequence analysis demonstrated that this isolate is unique, showing 96.7 % sequence similarity to the type strain of Arenimonas donghaensis and similarities of 93.0-93.8 % to species of the genera Thermomonas, Lysobacter and Silanimonas. The presence of ubiquinone Q-8, a polar lipid profile consisting of the major compounds diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine and the fatty acid profile were in accordance with the phylogenetic affiliation of CC-JY-1(T). DNA-DNA reassociation experiments between CC-JY-1(T) and A. donghaensis KACC 11381(T) resulted in a mean relatedness value of 32 %, indicating that strain CC-JY1(T) represents a novel species in the genus Arenimonas, for which we propose the name Arenimonas malthae sp. nov. The type strain is CC-JY-1(T) (=CCUG 53596(T) =CIP 109310(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Genes, rRNA
  • Molecular Sequence Data
  • Petroleum / microbiology*
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Soil Microbiology*
  • Taiwan
  • Ubiquinone / analysis
  • Xanthomonadaceae / chemistry
  • Xanthomonadaceae / classification*
  • Xanthomonadaceae / genetics
  • Xanthomonadaceae / isolation & purification*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Petroleum
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Ubiquinone
  • ubiquinone 8

Associated data

  • GENBANK/DQ239766