Molecular mechanism of target recognition by subtilin, a class I lanthionine antibiotic

Antimicrob Agents Chemother. 2008 Feb;52(2):612-8. doi: 10.1128/AAC.00836-07. Epub 2007 Nov 12.

Abstract

The increasing resistance of human pathogens to conventional antibiotics presents a growing threat to the chemotherapeutic management of infectious diseases. The lanthionine antibiotics, still unused as therapeutic agents, have recently attracted significant scientific interest as models for targeting and management of bacterial infections. We investigated the action of one member of this class, subtilin, which permeabilizes lipid membranes in a lipid II-dependent manner and binds bactoprenyl pyrophosphate, akin to nisin. The role the C and N termini play in target recognition was investigated in vivo and in vitro by using the natural N-terminally succinylated subtilin as well as enzymatically truncated subtilin variants. Fluorescence dequenching experiments show that subtilin induces leakage in membranes in a lipid II-dependent manner and that N-succinylated subtilin is roughly 75-fold less active. Solid-state nuclear magnetic resonance was used to show that subtilin forms complexes with membrane isoprenyl pyrophosphates. Activity assays in vivo show that the N terminus of subtilin plays a critical role in its activity. Succinylation of the N terminus resulted in a 20-fold decrease in its activity, whereas deletion of N-terminal Trp abolished activity altogether.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine / analogs & derivatives
  • Alanine / chemistry
  • Alanine / metabolism
  • Alanine / pharmacology
  • Anti-Bacterial Agents* / chemistry
  • Anti-Bacterial Agents* / metabolism
  • Anti-Bacterial Agents* / pharmacology
  • Bacteriocins* / chemistry
  • Bacteriocins* / metabolism
  • Bacteriocins* / pharmacology
  • Cell Membrane / chemistry
  • Cell Membrane / drug effects
  • Cell Membrane / metabolism*
  • Coated Vesicles / physiology
  • Diphosphates / metabolism*
  • Fluoresceins / metabolism
  • Lactococcus lactis / drug effects*
  • Magnetic Resonance Spectroscopy
  • Microbial Sensitivity Tests
  • Peptides* / chemistry
  • Peptides* / metabolism
  • Peptides* / pharmacology
  • Phosphatidylcholines
  • Phosphatidylglycerols
  • Succinic Acid / metabolism
  • Sulfides / chemistry
  • Sulfides / metabolism
  • Sulfides / pharmacology
  • Tryptophan / metabolism
  • Uridine Diphosphate N-Acetylmuramic Acid / analogs & derivatives*
  • Uridine Diphosphate N-Acetylmuramic Acid / chemical synthesis
  • Uridine Diphosphate N-Acetylmuramic Acid / chemistry
  • Uridine Diphosphate N-Acetylmuramic Acid / isolation & purification
  • Uridine Diphosphate N-Acetylmuramic Acid / metabolism

Substances

  • Anti-Bacterial Agents
  • Bacteriocins
  • Diphosphates
  • Fluoresceins
  • Peptides
  • Phosphatidylcholines
  • Phosphatidylglycerols
  • Sulfides
  • Uridine Diphosphate N-Acetylmuramic Acid
  • muramyl-NAc-(pentapeptide)pyrophosphoryl-undecaprenol
  • 6-carboxyfluorescein
  • 1,2-dioleoyl-sn-glycero-3-phosphoglycerol
  • Tryptophan
  • Succinic Acid
  • 1,2-oleoylphosphatidylcholine
  • subtilin
  • lanthionine
  • Alanine