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Genetics. 2007 Nov;177(3):1915-28. Epub 2007 Oct 18.

Linkage mapping of domestication loci in a large maize teosinte backcross resource.

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  • 1Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706, USA. william.briggs@syngenta.com

Abstract

An ultimate objective of QTL mapping is cloning genes responsible for quantitative traits. However, projects seldom go beyond segments <5 cM without subsequent breeding and genotyping lines to identify additional crossovers in a genomic region of interest. We report on a QTL analysis performed as a preliminary step in the development of a resource for map-based cloning of domestication and improvement genes in corn. A large backcross (BC)1 population derived from a cross between maize (Zea mays ssp. mays) and teosinte (ssp. parviglumis) was grown for the analysis. A total of 1749 progenies were genotyped for 304 markers and measured for 22 morphological traits. The results are in agreement with earlier studies showing a small number of genomic regions having greater impact on the morphological traits distinguishing maize and teosinte. Despite considerable power to detect epistasis, few QTL interactions were identified. To create a permanent resource, seed of BC1 plants was archived and 1000 BC2S6 BC1-derived lines are in development for fine mapping and cloning. The identification of four BC1 progeny with crossovers in a single gene, tb1, indicated that enough derived lines already exist to clone many QTL without the need to generate and identify additional crossovers.

PMID:
17947434
PMCID:
PMC2147989
DOI:
10.1534/genetics.107.076497
[PubMed - indexed for MEDLINE]
Free PMC Article
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