Syntrophomonas palmitatica sp. nov., an anaerobic, syntrophic, long-chain fatty-acid-oxidizing bacterium isolated from methanogenic sludge

Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):2137-2142. doi: 10.1099/ijs.0.64981-0.

Abstract

A mesophilic, syntrophic, fatty-acid-oxidizing anaerobic strain, designated MPA(T), was isolated from granular sludge in a mesophilic upflow anaerobic sludge blanket reactor used to treat palm oil mill effluent. Cells were slightly curved, non-motile rods. Spore formation was not observed. The optimal temperature for growth was around 37 degrees C and optimal pH for growth was 7.0. Strain MPA(T) was able to grow on crotonate or pentenoate plus butyrate in pure culture. In co-culture with the hydrogenotrophic methanogen Methanospirillum hungatei, strain MPA(T) was able to oxidize straight-chain saturated fatty acids with carbon chain lengths of C4-C18. The strain was unable to utilize sulfate, sulfite, thiosulfate, nitrate, fumarate, iron(III) or DMSO as an electron acceptor. The G+C content of the DNA was 45.0 mol%. Based on comparative 16S rRNA gene sequence analysis, strain MPA(T) was found to be a member of the genus Syntrophomonas and was most closely related to the type strains of Syntrophomonas curvata and Syntrophomonas sapovorans (sequence similarities of 94 %). Genetic and phenotypic characteristics demonstrated that strain MPA(T) represents a novel species, for which the name Syntrophomonas palmitatica sp. nov. is proposed. The type strain is MPA(T) (=JCM 14374(T)=NBRC 102128(T)=DSM 18709(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteria, Anaerobic / classification*
  • Bacteria, Anaerobic / genetics
  • Bacteria, Anaerobic / isolation & purification*
  • Bacteria, Anaerobic / physiology
  • Bacterial Typing Techniques
  • Base Composition
  • Bioreactors / microbiology
  • Coculture Techniques
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / metabolism*
  • Genes, rRNA
  • Gram-Negative Bacteria / classification*
  • Gram-Negative Bacteria / genetics
  • Gram-Negative Bacteria / isolation & purification*
  • Gram-Negative Bacteria / physiology
  • Hydrogen-Ion Concentration
  • Industrial Waste
  • Japan
  • Methanospirillum / physiology
  • Molecular Sequence Data
  • Oxidation-Reduction
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sewage / microbiology*
  • Temperature

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Industrial Waste
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sewage

Associated data

  • GENBANK/AB274039
  • GENBANK/AB274040