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Bioinformatics. 2007 Aug 15;23(16):2193-5. Epub 2007 Jun 6.

The MiSink Plugin: Cytoscape as a graphical interface to the Database of Interacting Proteins.

Author information

1
UCLA-DOE Institute for Genomics & Proteomics, Department of Chemistry, Howard Hughes Medical Institute, Box 951570, UCLA, Los Angeles, CA 90095, USA. lukasz@mbi.ucla.edu

Abstract

The MiSink Plugin converts Cytoscape, an open-source bioinformatics platform for network visualization, to a graphical interface for the database of interacting proteins (DIP: http://dip.doe-mbi.ucla.edu). Seamless integration is possible by providing bi-directional communication between Cytoscape and any Web site supplying data in XML or tab-delimited format.

AVAILABILITY:

MiSink is freely available for download at http://dip.doe-mbi.ucla.edu/Software.cgi.

PMID:
17553858
DOI:
10.1093/bioinformatics/btm304
[Indexed for MEDLINE]
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