Leeia oryzae gen. nov., sp. nov., isolated from a rice field in Korea

Int J Syst Evol Microbiol. 2007 Jun;57(Pt 6):1204-1208. doi: 10.1099/ijs.0.64582-0.

Abstract

A strictly aerobic, non-spore-forming, Gram-negative bacterium, designated strain HW7(T), was isolated from a rice field in Korea. Cells of strain HW7(T) were short rod-shaped and motile with single polar flagella. The major cellular fatty acids of strain HW7(T) were C(16 : 0) and summed feature 3 (C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH). The genomic DNA G+C content was 56 mol% and the major isoprenoid quinone was Q-8. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain HW7(T) forms a distinct lineage with respect to closely related genera within the class Betaproteobacteria and that the levels of 16S rRNA gene sequence similarity with respect to the type species of related genera are less than 93 %. On the basis of the physiological and phylogenetic data, strain HW7(T) represents a novel genus and species of the Betaproteobacteria, for which the name Leeia oryzae gen. nov., sp. nov. is proposed. The type strain is HW7(T) (=KCTC 12585(T)=DSM 17879(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Base Composition
  • Betaproteobacteria / classification*
  • Betaproteobacteria / genetics
  • Betaproteobacteria / isolation & purification*
  • Betaproteobacteria / physiology
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Genes, rRNA
  • Korea
  • Locomotion
  • Molecular Sequence Data
  • Oryza
  • Phylogeny
  • Quinones / analysis
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Soil Microbiology*
  • Spores, Bacterial

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Quinones
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ280369