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Bioinformatics. 2006 Dec 1;22(23):2960-1. Epub 2006 Oct 12.

ssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies.

Author information

1
Genetic Epidemiology Laboratory, QIMR 300 Herston Road, Brisbane, Queensland, 4006, Australia. daleN@qimr.edu.au

Abstract

ssSNPer is a novel user-friendly web interface that provides easy determination of the number and location of untested HapMap SNPs, in the region surrounding a tested HapMap SNP, which are statistically similar and would thus produce comparable and perhaps more significant association results. Identification of ssSNPs can have crucial implications for the interpretation of the initial association results and the design of follow-up studies.

AVAILABILITY:

http://fraser.qimr.edu.au/general/daleN/ssSNPer/

PMID:
17038340
DOI:
10.1093/bioinformatics/btl518
[Indexed for MEDLINE]
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