Degradation pathways of phenanthrene by Sinorhizobium sp. C4

Appl Microbiol Biotechnol. 2006 Aug;71(6):935-41. doi: 10.1007/s00253-005-0219-z. Epub 2005 Nov 30.

Abstract

Sinorhizobium sp. C4 was isolated from a polycyclic aromatic hydrocarbon (PAH)-contaminated site in Hilo, HI, USA. This isolate can utilize phenanthrene as a sole carbon source. Sixteen metabolites of phenanthrene were isolated and identified, and the metabolic map was proposed. Degradation of phenanthrene was initiated by dioxygenation on 1,2- and 3,4-C, where the 3,4-dioxygenation was dominant. Subsequent accumulation of 5,6- and 7,8-benzocoumarins confirmed dioxygenation on multiple positions and extradiol cleavage of corresponding diols. The products were further transformed to 1-hydroxy-2-naphthoic acid and 2-hydroxy-1-naphthoic acid then to naphthalene-1,2-diol. In addition to the typical degradation pathways, intradiol cleavage of phenanthrene-3,4-diol was proposed based on the observation of naphthalene-1,2-dicarboxylic acid. Degradation of naphthalene-1,2-diol proceeded through intradiol cleavage to produce trans-2-carboxycinnamic acid. Phthalic acid, 4,5-dihydroxyphthalic acid, and protocatechuic acid were identified as probable metabolites of trans-2-carboxycinnamic acid, but no trace salicylic acid or its metabolites were found. This is the first detailed study of PAH metabolism by a Sinorhizobium species. The results give a new insight into microbial degradation of PAHs.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biodegradation, Environmental
  • Gas Chromatography-Mass Spectrometry / methods
  • Models, Chemical
  • Molecular Structure
  • Phenanthrenes / chemistry
  • Phenanthrenes / metabolism*
  • Phthalic Acids / chemistry
  • Phthalic Acids / metabolism
  • Polycyclic Aromatic Hydrocarbons / metabolism
  • Sinorhizobium / metabolism*

Substances

  • Phenanthrenes
  • Phthalic Acids
  • Polycyclic Aromatic Hydrocarbons
  • phenanthrene
  • phthalic acid