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Bioinformatics. 2005 Sep 15;21(18):3691-3. Epub 2005 Jul 19.

PACdb: PolyA Cleavage Site and 3'-UTR Database.

Author information

1
The Jackson Laboratory, Bar Harbor, ME 04609, USA. joel.graber@jax.org

Abstract

The PolyA Cleavage Site and 3'-UTR Database (PACdb) is a web-accessible database that catalogs putative 3'-processing sites and 3'-UTR sequences for multiple organisms. Sites have been identified primarily via expressed sequence tag-genome alignments, enabling delineation of both the specificities and heterogeneity of 3'-processing events.

AVAILABILITY:

By web browser or CGI: PACdb: http://harlequin.jax.org/pacdb/; AtPACdb: http://harlequin.jax.org/atpacdb/.

SUPPLEMENTARY INFORMATION:

Available online at http://harlequin.jax.org/pacdb/supplemental.php.

PMID:
16030070
DOI:
10.1093/bioinformatics/bti589
[Indexed for MEDLINE]

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