Format

Send to

Choose Destination
Bioinformatics. 2005 Jun 15;21(12):2812-3. Epub 2005 Apr 6.

EGene: a configurable pipeline generation system for automated sequence analysis.

Author information

1
Depto. de Ciências da Computação, Instituto de Matemática e Estatística São Paulo, SP, 05508-900, Brazil. alan@ime.usp.br

Abstract

EGene is a generic, flexible and modular pipeline generation system that makes pipeline construction a modular job. EGene allows for third-party programs to be used and integrated according to the needs of distinct projects and without any previous programming or formal language experience being required. EGene comes with CoEd, a visual tool to facilitate pipeline construction and documentation. A series of components to build pipelines for sequence processing is provided.

AVAILABILITY:

http://www.lbm.fmvz.usp.br/egene/

CONTACT:

alan@ime.usp.br; argruber@usp.br

SUPPLEMENTARY INFORMATION:

http://www.lbm.fmvz.usp.br/egene/

PMID:
15814554
DOI:
10.1093/bioinformatics/bti424
[Indexed for MEDLINE]

Supplemental Content

Full text links

Icon for Silverchair Information Systems
Loading ...
Support Center