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Bioinformatics. 2003 Sep 1;19(13):1718-9.

FindGDPs: identification of primers for labeling microbial transcriptomes for DNA microarray analysis.

Author information

1
Department of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9048, USA.

Abstract

FindGDPs is a program that uses a greedy algorithm to quickly identify a set of genome-directed primers that specifically anneal to all of the open reading frames ina genome and that do not exhibit full-length complementarity to the members of another user-supplied set of nucleotide sequences.

PMID:
15593406
PMCID:
PMC2390821
DOI:
10.1093/bioinformatics/btg218
[Indexed for MEDLINE]
Free PMC Article

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