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Bioinformatics. 2005 Apr 1;21(7):1265-6. Epub 2004 Nov 30.

MapLinker: a software tool that aids physical map-linked whole genome shotgun assembly.

Author information

1
Center for Genome Sciences and Department of Molecular Biology and Pharmacology, Washington University School of Medicine, St. Louis, MO 63108, USA. jxu@watson.wustl.edu

Abstract

MapLinker is an analysis tool, as well as a browsing interface, that facilitates integration of whole genome sequence assembly with a clone-based physical map. Using the locations of sequence markers on the physical map, MapLinker generates a tentative sequence map of the genome that serves to verify the map and to guide genome-wide finishing.

PMID:
15572475
DOI:
10.1093/bioinformatics/bti122
[Indexed for MEDLINE]

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